Logo BioMed X GmbH

Research Scientist Machine Learning

Job

  • Level
    Experienced
  • Job Field
    Software, Data
  • Employment Type
    Full Time
  • Contract Type
    Temporary employment
  • Location
    Heidelberg
  • Working Model
    Hybrid, Onsite
  • Job Summary

    In this role, you will develop innovative graph representation learning methods for biomedical data analysis and implement integrated pipelines with large language models.

    Job Technologies

    Your role in the team

    • We are looking for a talented and curious Research Scientist (Machine Learning) to join our team, bringing fresh perspectives and advanced expertise to fuel innovative thinking and scientific excellence.
    • If you are passionate about transforming biomedical data into actionable knowledge within a collaborative environment, this position is for you.
    • Design, implement, and evaluate novel graph representation learning methods for knowledge graph reasoning and completion, and develop end-to-end pipelines that integrate graph-based reasoning with large language models.
    • Hands-on experience in multi-modal learning, combining structured (graph) and unstructured (text, image, omics) data for patient-level representation learning.
    • Ability to work independently and as part of an interdisciplinary team, and to drive research projects from conception to production.

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    Our expectations of you

    Qualifications

    • The ideal candidate will have:
    • Algorithm design skills to tackle complex challenges in digital twin technologies.
    • Vertrautheit mit modernen Data-Science- und KI-Techniken, einschließlich der Entwicklung und Anwendung von künstlicher Intelligenz, Foundation Models und agentischen KI-Systemen.
    • Background in life sciences and/or biomedical domain, even minor, is highly encouraged.
    • Strong engineering skills in PyTorch/PyTorch Lightning and relevant ML libraries (PyTorch Geometric, DGL, etc.) for implementing custom architectures, paired with best practices in reproducible software development (Git workflows, testing, linting, documentation, CI/CD).
    • Familiarity with containerization and environment management tools (e.g., Docker, uv, Conda) and orchestration of large-scale ML experiments on cloud platforms.
    • Strong problem-solving skills and scientific curiosity.
    • Excellent communication, organizational, and interpersonal skills.

    Experience

    • PhD (or equivalent experience) in Computer Science, Machine Learning, Applied Mathematics, Computational Biology, or a related field.

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    What we offer

    • This position is limited until June 30, 2028.
    • A dynamic, collaborative research environment at the interface of ML and biomedical science.
    • Close collaboration with our pharma partner (Sanofi) providing real-world biological problems and datasets.
    • Flexible working hours and hybrid working within Germany.
    • Access to a vast scientific network.
    • Opportunities to publish in top academic journals and present at top academic and industry conferences.
    • Mentorship and career development support, including conference attendance and networking opportunities.
    • Training on how scientific teams take a high-risk, high-reward idea from development to early-stage productization.
    • International, diverse, and positive work atmosphere that fosters personal and professional growth.

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    Topics You Will Work On

    Job Locations

    • Location Heidelberg

      Baden-Württemberg

      Germany

    About Your Employer

    BioMed X GmbH

    BioMed X GmbH

    BioMed X is an independent research and innovation center focused on biomedical research and drug development. The company collaborates with pharmaceutical partners, research institutes, and universities to translate scientific challenges into cooperative projects. It also supports early scientific talents in translational research environments.

    Description

  • Company Type
    Startup
  • Working Model
    Hybrid, Onsite
  • Industry
    Pharmaceutical Sector, Chemical Industry, Biotech
  • Logo BioMed X GmbH

    Research Scientist Machine Learning

    Location
    Heidelberg
    Working Model
    Hybrid, Onsite
    Diversity
    Open for all genders
    English Only
    English only required

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